260799 Peptidase_M76Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
260799	chr_1	Peptidase_M76	505419	506394	-	Peptidase_M76

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445672	Thaps260799.1, Thaps260799.4, Thaps260799.3, Thaps260799.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0009

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0172	0.30	0.000047 3000

Most Highly Correlated Transcripts

34158 DUF336 superfamily 0.9393	31751 PKCI_related 0.9229	37934 GRX_PICOT_like 0.9174	36037 Trypsin_2 0.915	36641 Aldolase_Class_I superfamily 0.9061	5105 hypothetical protein 0.9025
8065 hypothetical protein 0.9022	4357 hypothetical protein 0.899	41655 Chloroa_b-bind 0.8972	26991 GRX_GRXh_1_2_like 0.8971

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidase_M76 superfamily		Peptidase M76 family; This is a family of metalloproteases. Proteins in this family are also...	-	184.781	7.15E-59	37 - 204	superfamily	255541
Peptidase_M76 superfamily		Peptidase M76 family; This is a family of metalloproteases. Proteins in this family are also...	-	184.781	7.15E-59	37 - 204	superfamily	255541

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_12106	PHATRDRAFT_12106	153587	312895	443999	Cre17.g697934.t2.1	AT3G03420.1	539065

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006508 GO:0008237 GO:0008270 -

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