36037 Trypsin_2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36037 chr_8 Trypsin_2 1187340 1188995 + Trypsin_2

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps36037.1, Thaps36037.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0006

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0178
 0.28

Most Highly Correlated Transcripts

36037

Trypsin_2
1

4357

hypothetical protein
0.9401

21295

YCII superfamily
0.9323

35464

Nth
0.9276

5276

Aldo_ket_red
0.9253

268844

hypothetical protein
0.9251

5314

hypothetical protein
0.9245

889

hypothetical protein
0.9199

29506

cpn10
0.9195

23278

GrpE
0.9194

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Trypsin_2 Trypsin-like peptidase domain; This family includes trypsin like peptidase domains. cl19303 98.4693 2.43E-24 188 - 325 specific 257693
Trypsin_2 superfamily Trypsin-like peptidase domain; This family includes trypsin like peptidase domains. - 98.4693 2.43E-24 188 - 325 superfamily 267656

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13240 PHATRDRAFT_13240 207797 157705 67415 Not available AT3G27925.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004295 GO:0006508 GO:0005515 GO:0004252 GO:0004289 GO:0008132 GO:0008243 GO:0008991 GO:0016808 -

GO:0004295

NA

Details: 
NA
GO Category: 
NA

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0004252

serine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO Category: 
MF

GO:0004289

NA

Details: 
NA
GO Category: 
NA

GO:0008132

NA

Details: 
NA
GO Category: 
NA

GO:0008243

NA

Details: 
NA
GO Category: 
NA

GO:0008991

NA

Details: 
NA
GO Category: 
NA

GO:0016808

NA

Details: 
NA
GO Category: 
NA

Add comment

Log in to post comments