261430 Aa_trans superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261430 chr_2 Aa_trans superfamily 1373410 1376316 + Aa_trans superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446634 Thaps261430.2, Thaps261430.1, Thaps261430.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0401

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0109
 0.50

Most Highly Correlated Transcripts

31193

Indigoidine_A
0.9087

33724

PLN02856
0.8998

263268

Peptidase_M8 superfamily
0.8966

33039

SpoT
0.8956

261357

NAD_binding_8 superfamily
0.8907

9866

hypothetical protein
0.8886

bd643

(bd643) NA
0.8836

11938

NADB_Rossmann superfamily
0.8802

263051

ZntA
0.8746

24943

COG3899
0.874

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Aa_trans superfamily Transmembrane amino acid transporter protein; This transmembrane region is found in many amino acid... - 127.029 2.78E-31 444 - 719 superfamily 266708

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49391 PHATRDRAFT_49391 226705 257376 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005279 GO:0006865 GO:0016020 -

GO:0005279

NA

Details: 
NA
GO Category: 
NA

GO:0006865

amino acid transport

Details: 
The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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