33039 SpoT
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
33039 chr_3 SpoT 2057617 2060383 - SpoT
NCBI ID Ensembl Genomes exon ID
7452090 Thaps33039.2, Thaps33039.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0474
Normalized Mean Residue
Thaps_bicluster_0095
0.37
Sec7
0.9022
Aa_trans superfamily
0.8956
(Tp_HSF_4.2b) HSF_DNA-bind
0.8949
COG3899
0.8922
0.8861
MA3
0.8844
hypothetical protein
0.883
hypothetical protein
0.8829
YafJ
0.8823
COG3899
0.8805
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NT_Rel-Spo_like Nucleotidyltransferase (NT) domain of RelA- and SpoT-like ppGpp synthetases and hydrolases; This... cl11966 107.048 9.68E-27 281 - 397 specific 143389
Rel-Spo_like superfamily RelA- and SpoT-like ppGpp Synthetases and Hydrolases, catalytic domain; The Rel-Spo superfamily... - 107.048 9.68E-27 281 - 397 superfamily 264491
TGS_RelA_SpoT TGS_RelA_SpoT: The RelA (SpoT) protein, also referred to as ppGpp hydrolase/synthetase, is a... cl15768 89.8762 1.86E-21 451 - 510 specific 133438
TGS superfamily The TGS domain, named after the ThrRS, GTPase, and SpoT/RelA proteins where it occurs, is... - 89.8762 1.86E-21 451 - 510 superfamily 265779
ACT_4 ACT domain; ACT domains bind to amino acids and regulate associated enzyme domains. These ACT... cl09141 60.6266 3.83E-11 811 - 885 specific 257632
ACT superfamily ACT domains are commonly involved in specifically binding an amino acid or other small ligand... - 60.6266 3.83E-11 811 - 885 superfamily 263730
SpoT Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms /... - 602.318 0 37 - 885 multi-dom 223394
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11099 PHATRDRAFT_11099 201593 195742 457699 Cre03.g159800.t1.1 AT4G02260.3 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003824 GO:0015969 GO:0008728 -

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

guanosine tetraphosphate metabolic process

Details: 
The chemical reactions and pathways involving guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.
GO Category: 
BP

GTP diphosphokinase activity

Details: 
Catalysis of the reaction: ATP + GTP = AMP + guanosine 3'-diphosphate 5'-triphosphate.
GO Category: 
MF
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