262215 YEATS
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262215 chr_4 YEATS 1451824 1452767 - YEATS

Synonyms

NCBI ID Ensembl Genomes exon ID
7448832 Thaps262215.2, Thaps262215.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0191

Most Highly Correlated Transcripts

3287

hypothetical protein
0.9242

8500

PRP38 superfamily
0.9139

6630

hypothetical protein
0.9104

21947

GlcNAc superfamily
0.9073

34702

Sybindin superfamily
0.9049

13448

Sec1
0.9028

35314

GSH_Peroxidase
0.9024

22589

EMP24_GP25L
0.9012

2855

hypothetical protein
0.8987

23169

hypothetical protein
0.8963

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YEATS YEATS family; We have named this family the YEATS family, after `YNK7', `ENL', `... cl19881 119.207 1.26E-33 54 - 134 specific 251901
YEATS superfamily YEATS family; We have named this family the YEATS family, after `YNK7', `ENL', `... - 119.207 1.26E-33 54 - 134 superfamily 268234

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_6586 PHATRDRAFT_6586 154222 165958 105587 Cre06.g284050.t1.2 AT5G45600.1 354558

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005634 GO:0006355 -

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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