262400 ANK
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262400 chr_5 ANK 258839 260918 - ANK

Synonyms

NCBI ID Ensembl Genomes exon ID
7448475 Thaps262400.2, Thaps262400.1, Thaps262400.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0226

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0186
 0.38

Most Highly Correlated Transcripts

23887

hypothetical protein
0.9407

264345

SpoU
0.9376

38472

HA2
0.9138

33670

RNRR2
0.9123

269925

AAA_12 superfamily
0.8979

42621

HisS
0.8918

24123

fumC
0.8889

5053

hypothetical protein
0.8863

24038

hypothetical protein
0.8838

30691

AdoMet_MTases
0.8837

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 92.4466 4.86E-22 409 - 563 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 92.4466 4.86E-22 409 - 563 superfamily 238125
Ank_2 Ankyrin repeats (3 copies); Ankyrin repeats (3 copies). - 59.1919 8.08E-11 416 - 540 multi-dom 257303

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32784 PHATRDRAFT_32784 262271 314162 114940 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments