262698 (CDP1) Rcd1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262698 chr_6 (CDP1) Rcd1 290672 291933 - Rcd1

Synonyms

NCBI ID Ensembl Genomes exon ID
7448395 Thaps262698.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0427

Most Highly Correlated Transcripts

35136

NA
0.8779

35728

FtsZ_type1
0.8664

5141

hypothetical protein
0.8518

24720

hypothetical protein
0.8479

269387

hypothetical protein
0.8436

8937

hypothetical protein
0.8428

9108

PRP3 superfamily
0.8421

16114

PLN02350
0.8403

20799

LUC7
0.8333

33851

IBR
0.8329

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rcd1 Cell differentiation family, Rcd1-like; Two of the members in this family have been characterized... cl02160 481.343 1.57E-170 165 - 420 specific 190856
Rcd1 superfamily Cell differentiation family, Rcd1-like; Two of the members in this family have been characterized... - 481.343 1.57E-170 165 - 420 superfamily 242911

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54813 PHATRDRAFT_54813 276499 183825 414254 Cre12.g540400.t1.2 AT3G20800.1 559218

KEGG

KEGG description KEGG Pathway
RNA degradation map03018

GO Terms

Not available -

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