263784 GluZincin superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263784 chr_11a GluZincin superfamily 361265 363796 + GluZincin superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0077

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0086
 0.47

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9762

5659

hypothetical protein
0.8883

264628

UxaC
0.8877

bd624

(bd624) Glyco_transf_34 superfamily
0.886

25315

hypothetical protein
0.8791

25677

MgtE superfamily
0.8755

bd1893

(bd1893) NA
0.8739

bd1161

(bd1161) NA
0.8727

bd1078

(bd1078) NA
0.8719

bd718

(bd718) PRK10387
0.8698

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GluZincin superfamily Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4... - 537.157 0 92 - 797 superfamily 265459
Dcp Zn-dependent oligopeptidases [Amino acid transport and metabolism] - 285.707 8.36E-85 80 - 795 multi-dom 223416

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_24006 PHATRDRAFT_24006 136715 296847 Not available Cre02.g073400.t1.1 AT5G51540.1 565255

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0006508 GO:0008237 GO:0008270 GO:0004243 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008237

metallopeptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0004243

NA

Details: 
NA
GO Category: 
NA

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