264438 TPR
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264438 chr_17 TPR 248741 250629 + TPR

Synonyms

NCBI ID Ensembl Genomes exon ID
7453144 Thaps264438.1, Thaps264438.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0392

Most Highly Correlated Transcripts

26523

alcohol_DH_class_III
0.8835

21437

SapB
0.8788

11563

hypothetical protein
0.877

19158

GRX_PICOT_like
0.8682

30701

PRK05279
0.8658

40200

TRX_reduct
0.8649

19895

BTB
0.8611

269261

hypothetical protein
0.8605

18392

RabGAP-TBC
0.8586

21090

hypothetical protein
0.8567

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 80.8871 2.60E-18 474 - 573 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 80.8871 2.60E-18 474 - 573 superfamily 238112
NrfG FOG: TPR repeat [General function prediction only] - 73.3417 1.28E-14 310 - 576 multi-dom 223533

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32173 PHATRDRAFT_32173 203766 251800 449555 Cre14.g616750.t1.1 AT5G56290.1 556029

KEGG

KEGG description KEGG Pathway
Peroxisome map04146

GO Terms

Not available -

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