21437 SapB
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21437 chr_2 SapB 1767717 1769214 - SapB

Synonyms

NCBI ID Ensembl Genomes exon ID
7452298 Thaps21437.4, Thaps21437.1, Thaps21437.3, Thaps21437.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0481

Most Highly Correlated Transcripts

30701

PRK05279
0.9117

40200

TRX_reduct
0.9093

2855

hypothetical protein
0.9025

26523

alcohol_DH_class_III
0.8978

1852

UBCc superfamily
0.8909

37231

HECTc
0.8903

36764

PRK05279
0.8898

36995

LplA
0.8848

3715

hypothetical protein
0.8834

6997

hypothetical protein
0.8826

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MgtC superfamily MgtC family; The MgtC protein is found in an operon with the Mg2+ transporter protein MgtB. The... - 81.6144 5.17E-19 90 - 231 superfamily 111223
SapB Uncharacterized membrane protein [Function unknown] - 118.963 2.27E-31 77 - 231 multi-dom 224204

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 428627 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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