264466 OTU
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264466 chr_17 OTU 516444 517487 + OTU

Synonyms

NCBI ID Ensembl Genomes exon ID
7442147 Thaps264466.1, Thaps264466.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0488

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0029
 0.39

Most Highly Correlated Transcripts

bd1934

(bd1934) NA
0.9242

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9113

bd690

(bd690) NA
0.9083

bd1941

(bd1941) NA
0.8951

bd410

(bd410) HNHc
0.8767

bd1841

(bd1841) CAP10 superfamily
0.871

bd1786

(bd1786) GLTP superfamily
0.8656

bd1808

(bd1808) NA
0.8557

bd1790

(bd1790) NA
0.8483

bd1813

(bd1813) NA
0.8347

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
OTU OTU-like cysteine protease; This family is comprised of a group of predicted cysteine proteases,... cl19932 93.3004 1.36E-23 73 - 191 specific 251233
OTU superfamily OTU-like cysteine protease; This family is comprised of a group of predicted cysteine proteases,... - 93.3004 1.36E-23 73 - 191 superfamily 268285

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_41252 PHATRDRAFT_41252 154543 294765 68494 Cre05.g246050.t1.1 AT5G67170.1 536109

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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