264570 EEP superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
264570	chr_19a_19	EEP superfamily	79735	83301	-	EEP superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446257	Thaps264570.4, Thaps264570.2, Thaps264570.1, Thaps264570.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0050

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0034	0.54

Most Highly Correlated Transcripts

37497 cysE 0.8491	9247 hypothetical protein 0.8437	261400 NA 0.8437	3924 hypothetical protein 0.8426	261278 GRX_GRXh_1_2_like 0.8277	36525 PRK09427 0.8149
23605 Sulfotransfer_2 superfamily 0.8144	264598 AAA 0.8097	36007 Aldolase_II superfamily 0.8075	40010 Mito_carr 0.8064

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EEP superfamily		Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; This large superfamily includes the...	-	216.822	7.23E-63	819 - 1122	superfamily	260458

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44344	PHATRDRAFT_44344	164616	178820	237248	Cre13.g563550.t1.1	AT1G47510.1	501116

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004437 -

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