264783 MutL
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264783 chr_22 MutL 302968 307044 + MutL

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0406

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0053
 0.56

Most Highly Correlated Transcripts

1566

hypothetical protein
0.8679

7174

hypothetical protein
0.8653

3660

COG5038
0.8553

260980

Motor_domain superfamily
0.8539

6357

hypothetical protein
0.8513

263610

COG3899
0.8487

3139

hypothetical protein
0.8478

33724

PLN02856
0.8473

263051

ZntA
0.8449

7121

DUF3684 superfamily
0.8437

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MutL_Trans MutL_Trans: transducer domain, having a ribosomal S5 domain 2-like fold, conserved in the C-... cl02783 106.086 368 - 495 specific 238405
TopoII_MutL_Trans superfamily MutL_Trans: transducer domain, having a ribosomal S5 domain 2-like fold, conserved in the C-... - 106.086 368 - 495 superfamily 261445
MutL_C MutL C terminal dimerisation domain; MutL and MutS are key components of the DNA repair machinery... cl07336 116.3 851 - 1011 specific 214857
MutL_C superfamily MutL C terminal dimerization domain; MutL and MutS are key components of the DNA repair machinery... - 116.3 851 - 1011 superfamily 263302
MutL - 335.463 139 - 1047 multi-dom 223400

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14607 PHATRDRAFT_14607 214247 242883 447507 Cre04.g227000.t1.1 AT4G02460.1 Not available

KEGG

KEGG description KEGG Pathway
Mismatch repair map03430

GO Terms

GO:0006298 GO:0005524 -

GO:0006298

mismatch repair

Details: 
A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.
GO Category: 
BP

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

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