263610 COG3899
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263610 chr_9 COG3899 1185252 1189998 - COG3899

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps263610.4, Thaps263610.3, Thaps263610.2, Thaps263610.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0474

Most Highly Correlated Transcripts

263599

COG3899
0.9727

25600

hypothetical protein
0.9515

24852

hypothetical protein
0.9472

24063

COG3899
0.9458

25078

hypothetical protein
0.9363

9257

COG3899
0.9296

10298

hypothetical protein
0.929

262439

Bromodomain superfamily
0.928

25297

Chorein_N
0.9274

23754

hypothetical protein
0.9265

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_16 AAA ATPase domain; This family of domains contain a P-loop motif that is characteristic of the AAA... cl18944 77.8881 4.86E-16 548 - 736 specific 257559
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 77.8881 4.86E-16 548 - 736 superfamily 267297
COG3899 Predicted ATPase [General function prediction only] - 245.385 2.65E-67 549 - 1357 multi-dom 226415

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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