264863 YIP1 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264863 chr_22 YIP1 superfamily 876076 877066 + YIP1 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449421 Thaps264863.2, Thaps264863.3, Thaps264863.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0143

Most Highly Correlated Transcripts

32468

STKc_CDC2L1
0.9184

30701

PRK05279
0.9161

261400

NA
0.9074

38123

Arrestin_N superfamily
0.9049

37497

cysE
0.9047

34968

Glyco_hydro_47
0.9006

6960

Methyltransf_31
0.8993

20680

hypothetical protein
0.8974

8500

PRP38 superfamily
0.8967

4578

hypothetical protein
0.896

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YIP1 superfamily Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion] - 90.9909 2.66E-22 47 - 216 superfamily 227412

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14502 PHATRDRAFT_14502 165899 297752 315527 Cre07.g326400.t1.2 AT2G18840.1 284024

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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