26560 PLN03026
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
26560 chr_1 PLN03026 681877 683459 + PLN03026

Synonyms

NCBI ID Ensembl Genomes exon ID
7453439 Thaps26560.2, Thaps26560.1, Thaps26560.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0222

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0083
 0.43

Most Highly Correlated Transcripts

21837

HSP33
0.8471

24550

W2_eIF4G1_like
0.8375

4372

hypothetical protein
0.8366

36429

TLC
0.8359

268062

PRK14293
0.8324

268596

CBF
0.8237

42282

HA2
0.8237

264306

UT superfamily
0.822

268238

PRK05192
0.8214

bd1807

(bd1807) RRS1 superfamily
0.8202

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent... cl18945 224.528 1.49E-69 60 - 377 specific 99734
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 224.528 1.49E-69 60 - 377 superfamily 267298
PLN03026 histidinol-phosphate aminotransferase; Provisional - 548.915 0 1 - 380 multi-dom 178597

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_38891 PHATRDRAFT_38891 278740 209753 425759 Cre16.g672385.t1.1 AT5G10330.3 349166

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0008152 GO:0016740 GO:0009058 GO:0016769 GO:0000105 GO:0004400 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016740

transferase activity

Details: 
Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
GO Category: 
MF

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

GO:0016769

transferase activity, transferring nitrogenous groups

Details: 
Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor).
GO Category: 
MF

GO:0000105

histidine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.
GO Category: 
BP

GO:0004400

histidinol-phosphate transaminase activity

Details: 
Catalysis of the reaction: L-histidinol-phosphate + 2-oxoglutarate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + L-glutamate.
GO Category: 
MF

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