27892 OAT_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
27892 chr_4 OAT_like 1150705 1152568 - OAT_like

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0486

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0088
 0.37

Most Highly Correlated Transcripts

bd1885

(bd1885) NA
0.879

269704

PRK09225
0.7946

bd1487

(bd1487) PLN02688
0.7876

268070

Trp-synth-beta_II superfamily
0.7842

bd1888

(bd1888) NA
0.7815

bd616

(bd616) NA
0.7782

bd824

(bd824) NA
0.7769

bd1891

(bd1891) COG3899
0.7767

268398

PRK04173
0.7762

24832

hypothetical protein
0.7726

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-... cl18945 440.852 8.67E-152 48 - 449 specific 99735
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 440.852 8.67E-152 48 - 449 superfamily 267298
BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism] - 293.299 8.33E-94 60 - 452 multi-dom 223239

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_27726 PHATRDRAFT_27726 269005 254551 417313 Cre11.g474800.t1.2 AT5G46180.1 355945

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0008483 GO:0030170 GO:0004587 -

GO:0008483

transaminase activity

Details: 
Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
GO Category: 
MF

GO:0030170

pyridoxal phosphate binding

Details: 
Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO Category: 
MF

GO:0004587

ornithine-oxo-acid transaminase activity

Details: 
Catalysis of the reaction: L-ornithine + a 2-oxo acid = L-glutamate 5-semialdehyde + an L-amino acid.
GO Category: 
MF

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