30550 Utp11
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
30550 chr_20 Utp11 214771 215997 - Utp11

Synonyms

NCBI ID Ensembl Genomes exon ID
7448507 Thaps30550.2, Thaps30550.1, Thaps30550.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0318

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0229
 0.40

Most Highly Correlated Transcripts

bd1667

(bd1667) Mpp10
0.9316

bd1709

(bd1709) NA
0.9071

bd1875

(bd1875) NA
0.9038

15992

COG0820
0.9026

bd1877

(bd1877) NA
0.8993

270148

NBD_sugar-kinase_HSP70_actin superfamily
0.8815

4108

hypothetical protein
0.8773

262692

0.8432

bd96

(bd96) eIF-3_zeta
0.8346

22441

hypothetical protein
0.8295

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Utp11 Utp11 protein; This protein is found to be part of a large ribonucleoprotein complex containing the... cl02164 148.292 1.15E-42 10 - 296 specific 252304
Utp11 superfamily Utp11 protein; This protein is found to be part of a large ribonucleoprotein complex containing the... - 148.292 1.15E-42 10 - 296 superfamily 261203

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_21538 PHATRDRAFT_21538 275553 197796 225122 Cre13.g573050.t1.2 AT3G60360.1 248257

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006364 GO:0030529 -

GO:0006364

rRNA processing

Details: 
Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
GO Category: 
BP

GO:0030529

ribonucleoprotein complex

Details: 
A macromolecular complex containing both protein and RNA molecules.
GO Category: 
CC

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