15992 COG0820
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
15992 chr_6 COG0820 1279986 1281803 - COG0820

Synonyms

NCBI ID Ensembl Genomes exon ID
7442407 Thaps15992.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0219

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0268
 0.24

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9617

bd1709

(bd1709) NA
0.9609

bd1667

(bd1667) Mpp10
0.9574

270148

NBD_sugar-kinase_HSP70_actin superfamily
0.9296

bd96

(bd96) eIF-3_zeta
0.9237

29018

NMD3
0.919

22672

hypothetical protein
0.9181

32158

NOC3
0.9121

32374

TPR
0.911

25689

hypothetical protein
0.9097

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG0820 Predicted Fe-S-cluster redox enzyme [General function prediction only] - 370.49 4.03E-123 95 - 426 multi-dom 223890

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_3052 PHATRDRAFT_3052 149971 206834 54121 Cre01.g043000.t1.1 AT2G39670.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005554 GO:0003824 GO:0005506 -

GO:0005554

NA

Details: 
NA
GO Category: 
NA

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0005506

iron ion binding

Details: 
Interacting selectively and non-covalently with iron (Fe) ions.
GO Category: 
MF

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