30882 TPT
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
30882 chr_1 TPT 2201180 2202773 - TPT

Synonyms

NCBI ID Ensembl Genomes exon ID
7452515 Thaps30882.3, Thaps30882.2, Thaps30882.4, Thaps30882.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0454

Most Highly Correlated Transcripts

269624

TIM_phosphate_binding superfamily
0.9194

4674

zf-DHHC
0.8909

6028

NA
0.8844

268293

Lactamase_B superfamily
0.8756

5137

hypothetical protein
0.8749

37118

FeThRed_B
0.8739

25040

NA
0.8728

21271

hypothetical protein
0.8715

32610

hypothetical protein
0.8684

3854

hypothetical protein
0.8675

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPT superfamily Triose-phosphate Transporter family; This family includes transporters with a specificity for... - 81.4476 2.09E-18 194 - 343 superfamily 251760
TPT superfamily Triose-phosphate Transporter family; This family includes transporters with a specificity for... - 81.4476 2.09E-18 194 - 343 superfamily 251760

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_38686 PHATRDRAFT_38686 242695 200062 Not available Cre07.g330850.t1.1 AT1G06470.2 288941

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments