31062 WD40
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31062 chr_1 WD40 2527495 2529037 - WD40

Synonyms

NCBI ID Ensembl Genomes exon ID
7445493 Thaps31062.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0094

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0030
 0.47

Most Highly Correlated Transcripts

12193

hypothetical protein
0.8942

31391

KISc
0.8823

3183

PTZ00018
0.8745

37302

Abhydrolase_5
0.8683

37309

PLN00158
0.8613

25864

hypothetical protein
0.861

37432

PTZ00018
0.8598

12133

Trypan_PARP
0.8578

11377

hypothetical protein
0.8565

261727

KR
0.8559

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 149.022 7.54E-41 200 - 479 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 149.022 7.54E-41 200 - 479 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 144.846 5.31E-38 199 - 481 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd79 PHATRDRAFT_bd79 206915 194858 Not available Cre09.g399911.t1.1 Not available 483739

KEGG

KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120

GO Terms

Not available -

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