3179 WD40 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3179 chr_3 WD40 superfamily 332328 334443 - WD40 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442488 Thaps3179.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0171

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0021
 0.47

Most Highly Correlated Transcripts

270251

(NTT4) hypothetical protein
0.9349

bd392

(bd392) DEXDc
0.9261

2580

AarF
0.9042

9166

hypothetical protein
0.9037

2581

hypothetical protein
0.8976

bd874

(bd874) NA
0.8957

33766

ATPase-IIA2_Ca
0.8941

3206

CAP10 superfamily
0.8937

20753

PDI_a_family
0.888

9167

hypothetical protein
0.8875

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 66.9748 2.11E-12 243 - 471 superfamily 238121

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47119 PHATRDRAFT_47119 232933 180475 Not available Not available Not available 261850

KEGG

KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120

GO Terms

Not available -

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