32209 fer2Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
32209	chr_2	fer2	1291221	1291853	+	fer2

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450405	Thaps32209.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0009

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0117	0.49	7400 44000

Most Highly Correlated Transcripts

37934 GRX_PICOT_like 0.9239	5074 hypothetical protein 0.9127	10201 hypothetical protein 0.91	32285 COG1832 0.9061	42380 RRM_ist3_like 0.905	264096 COX17 0.8992
1626 Acid_PPase superfamily 0.894	30701 PRK05279 0.8929	36879 BolA 0.8899	261982 (ACB1) ACBP 0.8897

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
fer2		2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron...	cl00159	58.1752	8.77E-12	94 - 192	specific	238126
fer2 superfamily		2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron...	-	58.1752	8.77E-12	94 - 192	superfamily	260226

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_14478	PHATRDRAFT_14478	163361	309705	Not available	Not available	Not available	494192

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0005506 GO:0006118 -

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