32430 DUF1336 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32430 chr_2 DUF1336 superfamily 1150460 1151188 + DUF1336 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450377 Thaps32430.2, Thaps32430.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0466

Most Highly Correlated Transcripts

bd624

(bd624) Glyco_transf_34 superfamily
0.9268

37497

cysE
0.9021

30701

PRK05279
0.8966

bd719

(bd719) NA
0.8938

bd687

(bd687) NA
0.8911

4295

hypothetical protein
0.8855

bd668

(bd668) NA
0.878

7547

hypothetical protein
0.8771

bd1863

(bd1863) NA
0.8748

24525

hypothetical protein
0.8737

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF1336 superfamily Protein of unknown function (DUF1336); This family represents the C-terminus (approximately 250... - 183.276 1.63E-57 1 - 207 superfamily 254039

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_10508 PHATR_10508 179062 261625 354955 Cre17.g745697.t1.1 AT5G35180.1 519461

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004190 GO:0006508 -

GO:0004190

aspartic-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

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