34742 cyclophilin superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
34742	chr_6	cyclophilin superfamily	1292960	1293815	-	cyclophilin superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453268	Thaps34742.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0225

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0191	0.44	0.0000000058 2.1

Most Highly Correlated Transcripts

261823 FIG superfamily 0.9206	36007 Aldolase_II superfamily 0.9012	31150 rpsI 0.9007	23018 RNase_PH superfamily 0.8968	268443 SAICAR_synt_Sc 0.8946	38679 UBQ superfamily 0.8917
354 PTZ00424 0.89	3904 DUF3611 superfamily 0.8868	36641 Aldolase_Class_I superfamily 0.8851	20712 hypothetical protein 0.8851

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
cyclophilin superfamily		cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic...	-	129.684	1.03E-36	120 - 282	superfamily	260252

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_50014	PHATRDRAFT_50014	Not available	282990	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

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