3516 TRAPP
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3516 chr_3 TRAPP 1148183 1149088 + TRAPP

Synonyms

NCBI ID Ensembl Genomes exon ID
7451687 Thaps3516.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0095

Most Highly Correlated Transcripts

6532

Eapp_C superfamily
0.9267

262193

FHA
0.9215

3204

hypothetical protein
0.9094

38331

YIP1 superfamily
0.9049

2944

hypothetical protein
0.9041

2494

UAA
0.9025

2732

Cyclophilin_PPIL3_like
0.9019

1857

p23_NUDC_like
0.8999

261400

NA
0.8973

23170

hypothetical protein
0.8946

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TRAPP Transport protein particle (TRAPP) component; TRAPP plays a key role in the targeting and/or fusion... cl02135 97.2555 1.11E-24 123 - 301 specific 252338
TRAPP superfamily Transport protein particle (TRAPP) component; TRAPP plays a key role in the targeting and/or fusion... - 97.2555 1.11E-24 123 - 301 superfamily 261192

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48567 PHATRDRAFT_48567 143252 7671 354528 Cre16.g663650.t1.2 AT3G05000.1 320767

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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