35342 Dynein_heavy superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35342 chr_7 Dynein_heavy superfamily 1767466 1780148 + Dynein_heavy superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0322

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0093
 0.41

Most Highly Correlated Transcripts

2984

Dynein_heavy superfamily
0.8848

4047

hypothetical protein
0.8759

4108

hypothetical protein
0.8738

24942

COG3899
0.8668

5829

hypothetical protein
0.8599

22355

hypothetical protein
0.8561

10533

hypothetical protein
0.8506

23096

hypothetical protein
0.8482

24216

hypothetical protein
0.8478

25223

SNF2_N
0.8468

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Dynein_heavy superfamily Dynein heavy chain and region D6 of dynein motor; This family represents the C-terminal region of... - 596.601 0 3463 - 3996 superfamily 251681
AAA_8 superfamily P-loop containing dynein motor region D4; The 380 kDa motor unit of dynein belongs to the AAA class... - 340.772 6.41E-105 2443 - 2710 superfamily 193256
DHC_N2 superfamily Dynein heavy chain, N-terminal region 2; Dyneins are described as motor proteins of eukaryotic... - 329.158 4.94E-99 927 - 1347 superfamily 254773
DHC_N2 superfamily Dynein heavy chain, N-terminal region 2; Dyneins are described as motor proteins of eukaryotic... - 329.158 4.94E-99 927 - 1347 superfamily 254773
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 321.183 1.20E-98 1481 - 1711 superfamily 267297
AAA_7 superfamily P-loop containing dynein motor region D3; the 380 kDa motor unit of dynein belongs to the AAA class... - 304.937 1.78E-92 2098 - 2362 superfamily 193251
AAA_9 superfamily ATP-binding dynein motor region D5; The 380 kDa motor unit of dynein belongs to the AAA class of... - 300.364 1.71E-91 3091 - 3322 superfamily 193257
MT superfamily Microtubule-binding stalk of dynein motor; the 380 kDa motor unit of dynein belongs to the AAA... - 288.089 1.34E-85 2723 - 3064 superfamily 193253

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_31156 PHATRDRAFT_31156 Not available 236753 67811 Cre02.g107350.t1.1 Not available 503646

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004197 GO:0006508 GO:0005524 GO:0016887 GO:0000166 GO:0017111 -

GO:0004197

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016887

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

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