24942 COG3899
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24942 chr_14 COG3899 963193 969520 + COG3899

Synonyms

NCBI ID Ensembl Genomes exon ID
7451600 Thaps24942.2, Thaps24942.3, Thaps24942.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0334

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0147
 0.38

Most Highly Correlated Transcripts

269314

SMK-1 superfamily
0.8792

22355

hypothetical protein
0.8771

23096

hypothetical protein
0.874

bd524

(bd524) NA
0.8685

35342

Dynein_heavy superfamily
0.8668

24852

hypothetical protein
0.8646

36301

HMG-box
0.8635

268194

(Tp_Myb4R1b) SANT
0.8601

10533

hypothetical protein
0.8578

4047

hypothetical protein
0.8556

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_16 AAA ATPase domain; This family of domains contain a P-loop motif that is characteristic of the AAA... cl18944 76.7325 1.62E-15 921 - 1112 specific 257559
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 76.7325 1.62E-15 921 - 1112 superfamily 267297
COG3899 Predicted ATPase [General function prediction only] - 232.674 7.08E-63 922 - 1746 multi-dom 226415

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016740 GO:0031177 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016740

transferase activity

Details: 
Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
GO Category: 
MF

GO:0031177

phosphopantetheine binding

Details: 
Interacting selectively and non-covalently with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate).
GO Category: 
MF

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