36501 UBCc superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
36501	chr_10	UBCc superfamily	585087	587312	+	UBCc superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446851	Thaps36501.2, Thaps36501.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0228

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0186	0.38	2800 0.0000000058

Most Highly Correlated Transcripts

264345 SpoU 0.8558	bd1807 (bd1807) RRS1 superfamily 0.8544	6780 hypothetical protein 0.832	25746 hypothetical protein 0.8306	26931 GTP_cyclohydro1 0.829	23210 hypothetical protein 0.8282
33670 RNRR2 0.8246	bd524 (bd524) NA 0.8232	30691 AdoMet_MTases 0.8186	25767 hypothetical protein 0.8185

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UBCc superfamily		Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated...	-	93.8061	3.05E-22	366 - 520	superfamily	260221

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_6645	PHATRDRAFT_6645	214195	312121	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004840 GO:0006464 GO:0006512 GO:0004842 -

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