36673 PTZ00318
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36673 chr_11a PTZ00318 179506 181368 - PTZ00318

Synonyms

NCBI ID Ensembl Genomes exon ID
7443264 Thaps36673.3, Thaps36673.4, Thaps36673.1, Thaps36673.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0326

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9443

267979

HCO3_cotransp superfamily
0.9155

38011

PKc_like superfamily
0.9087

1175

hypothetical protein
0.9032

19158

GRX_PICOT_like
0.8993

268443

SAICAR_synt_Sc
0.8989

bd643

(bd643) NA
0.8881

26874

CLPTM1 superfamily
0.8877

11563

hypothetical protein
0.8851

37609

PKc_like superfamily
0.884

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PTZ00318 NADH dehydrogenase-like protein; Provisional - 397.6 2.04E-134 57 - 474 multi-dom 185553

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11373 PHATRDRAFT_11373 191160 70508 463050 Not available AT2G29990.1 547440

KEGG

KEGG description KEGG Pathway
Oxidative phosphorylation map00190

GO Terms

GO:0006118 GO:0016491 GO:0015036 GO:0003954 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0015036

disulfide oxidoreductase activity

Details: 
Catalysis of the reaction: substrate with reduced sulfide groups = substrate with oxidized disulfide bonds.
GO Category: 
MF

GO:0003954

NADH dehydrogenase activity

Details: 
Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor.
GO Category: 
MF

Add comment

Log in to post comments