37410 TCP1_alpha
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37410 chr_14 TCP1_alpha 477858 479583 - TCP1_alpha

Synonyms

NCBI ID Ensembl Genomes exon ID
7452676 Thaps37410.2, Thaps37410.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0290

Most Highly Correlated Transcripts

36007

Aldolase_II superfamily
0.9502

55

hypothetical protein
0.9141

21875

zf-CW
0.8996

264556

FBPase
0.8985

24525

hypothetical protein
0.8978

24538

hypothetical protein
0.8965

bd1465

(bd1465) PKc_like superfamily
0.8963

32216

(RT5) rpsE_bact
0.8961

bd894

(bd894) Peptidase_M14_like superfamily
0.8946

21455

hypothetical protein
0.8935

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in... cl02777 870.065 0 3 - 538 specific 239451
chaperonin_like superfamily chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share... - 870.065 0 3 - 538 superfamily 261443

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_26980 PHATRDRAFT_26980 273802 253233 451447 Cre10.g439100.t1.2 AT3G20050.1 553624

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 GO:0005524 GO:0044267 GO:0003763 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0044267

cellular protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes cellular protein modification.
GO Category: 
BP

GO:0003763

NA

Details: 
NA
GO Category: 
NA

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