21875 zf-CW
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21875 chr_3 zf-CW 1565103 1566749 - zf-CW

Synonyms

NCBI ID Ensembl Genomes exon ID
7449514 Thaps21875.1, Thaps21875.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0289

Most Highly Correlated Transcripts

36007

Aldolase_II superfamily
0.9541

268443

SAICAR_synt_Sc
0.9153

19158

GRX_PICOT_like
0.9051

23018

RNase_PH superfamily
0.9009

37410

TCP1_alpha
0.8996

37497

cysE
0.8971

24525

hypothetical protein
0.894

55

hypothetical protein
0.8936

23819

hypothetical protein
0.8909

264598

AAA
0.8907

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-CW superfamily CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved... - 63.2255 5.30E-13 195 - 242 superfamily 254236
zf-CW superfamily CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved... - 63.2255 5.30E-13 195 - 242 superfamily 254236

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43179 PHATRDRAFT_43179 Not available 180185 110123 Not available Not available 486618

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008270 -

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

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