37443 Cupin_2 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
37443	chr_14	Cupin_2 superfamily	399314	400166	-	Cupin_2 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452434	Thaps37443.2, Thaps37443.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0211

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0131	0.35	690 1200

Most Highly Correlated Transcripts

bd1852 (bd1852) NA 0.8773	38715 PLN00120 0.8754	bd758 (bd758) NA 0.8744	31169 PRX_BCP 0.8734	36078 PRX5_like 0.8709	39813 Chloroa_b-bind superfamily 0.8706
32321 TRX_family 0.8702	22171 hypothetical protein 0.8658	37338 Thioredoxin_like superfamily 0.8656	38608 SDR_a5 0.8587

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cupin_2 superfamily		Cupin domain; This family represents the conserved barrel domain of the 'cupin'...	-	158.288	2.94E-48	42 - 209	superfamily	266563

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
8827	PHATRDRAFT_25000	PHATRDRAFT_25000	269716	223183	Not available	Cre12.g542850.t1.2	AT5G43850.1	Not available

KEGG

KEGG description	KEGG Pathway
Metabolic pathways	map01100

GO Terms

GO:0016701 GO:0018553 GO:0018554 -

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