38608 SDR_a5
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38608 chr_22 SDR_a5 911555 912659 - SDR_a5

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps38608.1, Thaps38608.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0029

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0142
 0.24

Most Highly Correlated Transcripts

25787

hypothetical protein
0.9965

4888

hypothetical protein
0.9578

11831

hypothetical protein
0.9502

264039

(CYP2) p450 superfamily
0.9478

5545

hypothetical protein
0.9464

33701

DUF4079
0.9415

9776

hypothetical protein
0.9386

20584

hypothetical protein
0.9364

39841

ArsA_ATPase
0.9341

1219

PAP_fibrillin superfamily
0.9257

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SDR_a5 atypical (a) SDRs, subgroup 5; This subgroup contains atypical SDRs, some of which are identified... cl09931 170.494 1.81E-51 80 - 298 specific 187554
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 170.494 1.81E-51 80 - 298 superfamily 263925

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10747 PHATRDRAFT_10747 212595 180040 120739 Cre11.g467755.t1.1 AT2G34460.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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