38312 PTZ00318
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38312 chr_19b_31 PTZ00318 22275 24800 - PTZ00318

Synonyms

NCBI ID Ensembl Genomes exon ID
7444376 Thaps38312.3, Thaps38312.2, Thaps38312.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0033

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0287
 0.36

Most Highly Correlated Transcripts

270251

(NTT4) hypothetical protein
0.936

bd392

(bd392) DEXDc
0.9128

268592

VDE superfamily
0.8797

4465

hypothetical protein
0.8439

31829

CBS_like
0.8435

38608

SDR_a5
0.8414

36669

TPT
0.8398

bd789

(bd789) ABC_ATPase superfamily
0.8365

bd446

(bd446) HrpA
0.8351

31169

PRX_BCP
0.8317

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PTZ00318 NADH dehydrogenase-like protein; Provisional - 282.426 8.56E-87 285 - 753 multi-dom 185553

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
19937 PHATRDRAFT_16430 PHATRDRAFT_16430 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Oxidative phosphorylation map00190

GO Terms

GO:0006118 GO:0016491 GO:0015036 GO:0003954 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0015036

disulfide oxidoreductase activity

Details: 
Catalysis of the reaction: substrate with reduced sulfide groups = substrate with oxidized disulfide bonds.
GO Category: 
MF

GO:0003954

NADH dehydrogenase activity

Details: 
Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor.
GO Category: 
MF

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