3863 DadAThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
3863	chr_3	DadA	1989437	1991103	+	DadA

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445371	Thaps3863.2, Thaps3863.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0376

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0058	0.44	0.011 1.6

Most Highly Correlated Transcripts

21968 hypothetical protein 0.9266	bd1959 (bd1959) NA 0.9117	1945 hypothetical protein 0.8799	bd415 (bd415) arom_aa_hydroxylase superfamily 0.8641	bd1787 (bd1787) GLTP 0.8566	bd1806 (bd1806) AAT_I superfamily 0.8513
3706 hypothetical protein 0.8469	bd1808 (bd1808) NA 0.8456	bd1790 (bd1790) NA 0.8307	264395 PI3Kc_like superfamily 0.83

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DadA		Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	-	85.7215	2.28E-18	118 - 492	multi-dom	223737

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_39247	PHATRDRAFT_39247	195188	295183	120167	Not available	AT2G22650.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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