1945 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1945 chr_1 hypothetical protein 2786447 2787703 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7452554 Thaps1945.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0376

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0058
 0.44

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9689

21968

hypothetical protein
0.8957

3863

DadA
0.8799

264395

PI3Kc_like superfamily
0.841

bd1959

(bd1959) NA
0.8243

bd1806

(bd1806) AAT_I superfamily
0.8234

3706

hypothetical protein
0.8124

10615

DnaQ_like_exo superfamily
0.811

bd1472

(bd1472) rpmG
0.8012

6151

hypothetical protein
0.7893

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 180269 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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