38685 Kinesin
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38685 chr_22 Kinesin 402500 405007 + Kinesin

Synonyms

NCBI ID Ensembl Genomes exon ID
7442823 Thaps38685.2, Thaps38685.1, Thaps38685.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0171

Most Highly Correlated Transcripts

262611

RabGAP-TBC
0.8868

261357

NAD_binding_8 superfamily
0.8733

27048

TM_PBP1_branched-chain-AA_like superfamily
0.8705

260784

sec14-like cytosolic factor
0.8693

30149

Solute_trans_a
0.8688

31599

MoCF_BD superfamily
0.8662

263089

(BRAC2) BRCA-2_OB1
0.8645

12846

SNF2_N
0.8578

8003

PIG-L
0.8509

264326

probable cytochrome P450
0.8508

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Kinesin Kinesin motor domain; Kinesin motor domain. cl00286 380.782 1.66E-125 107 - 446 specific 249695
Motor_domain superfamily Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the... - 380.782 1.66E-125 107 - 446 superfamily 260327
KIP1 Kinesin-like protein [Cytoskeleton] - 260.441 6.26E-77 126 - 483 multi-dom 227392

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15853 PHATRDRAFT_15853 158305 110261 Not available Cre13.g568450.t1.1 AT1G59540.1 493744

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003777 GO:0005524 GO:0005875 GO:0007018 -

GO:0003777

microtubule motor activity

Details: 
Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0005875

microtubule associated complex

Details: 
Any multimeric complex connected to a microtubule.
GO Category: 
CC

GO:0007018

microtubule-based movement

Details: 
A microtubule-based process that is mediated by motor proteins and results in the movement of organelles, other microtubules, or other particles along microtubules.
GO Category: 
BP

Add comment

Log in to post comments