30149 Solute_trans_aThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
30149	chr_15	Solute_trans_a	588212	589772	-	Solute_trans_a

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450261	Thaps30149.1, Thaps30149.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0137

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0289	0.38	5.7 330

Most Highly Correlated Transcripts

27048 TM_PBP1_branched-chain-AA_like superfamily 0.9054	9148 hypothetical protein 0.8992	24124 hypothetical protein 0.8941	261357 NAD_binding_8 superfamily 0.894	9569 hypothetical protein 0.8907	263051 ZntA 0.8899
34442 CAP_ED 0.8869	37362 MCM 0.8861	37336 Beach 0.8842	8003 PIG-L 0.8835

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Solute_trans_a superfamily		Organic solute transporter Ostalpha; This family is a transmembrane organic solute transport...	-	319.109	3.27E-107	2 - 270	superfamily	252064
Solute_trans_a superfamily		Organic solute transporter Ostalpha; This family is a transmembrane organic solute transport...	-	319.109	3.27E-107	2 - 270	superfamily	252064

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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