3878 (PPI2) cyclophilin_ABH_likeThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
3878	chr_3	(PPI2) cyclophilin_ABH_like	2019905	2020764	+	cyclophilin_ABH_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445376	Thaps3878.1, Thaps3878.3, Thaps3878.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0029

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0168	0.24	15 1.3

Most Highly Correlated Transcripts

bd1306 (bd1306) NA 0.963	bd1645 (bd1645) tpt 0.9526	bd718 (bd718) PRK10387 0.9526	35878 PLN02307 0.9363	bd208 (bd208) DUF3529 0.935	bd1387 (bd1387) psbE 0.9335
bd1820 (bd1820) Fasciclin 0.9325	32321 TRX_family 0.9293	21300 NADB_Rossmann superfamily 0.929	976 hypothetical protein 0.9276

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
cyclophilin_ABH_like		cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans...	cl00197	291.853	5.09E-101	42 - 200	specific	238907
cyclophilin superfamily		cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic...	-	291.853	5.09E-101	42 - 200	superfamily	260252

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44585	PHATRDRAFT_44585	183665	240164	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

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