39424 (RL12) PLN03072
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
39424 chr_2 (RL12) PLN03072 510457 511215 - PLN03072
NCBI ID Ensembl Genomes exon ID
7448669 Thaps39424.2, Thaps39424.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0047
Normalized Mean Residue
Thaps_bicluster_0227
0.33
PTZ00154
0.8686
(RS7) Ribosomal_S7e
0.848
(RL18a) RPL20A
0.8299
(bd756) NA
0.8269
(RL9) PTZ00027
0.8224
(RS3A) Ribosomal_S3Ae
0.8052
(RS13) PTZ00072
0.8026
(RS9) PLN00189
0.7925
(RL8) PTZ00180
0.7881
(RS16) PLN00210
0.7713
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L11 superfamily Ribosomal protein L11. Ribosomal protein L11, together with proteins L10 and L7/L12, and 23S rRNA,... - 146.057 6.51E-45 14 - 142 superfamily 100101
Ribosomal_L11 superfamily Ribosomal protein L11. Ribosomal protein L11, together with proteins L10 and L7/L12, and 23S rRNA,... - 146.057 6.51E-45 14 - 142 superfamily 100101
PLN03072 60S ribosomal protein L12; Provisional - 274.763 6.36E-95 4 - 164 multi-dom 178621
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_28979 PHATRDRAFT_28979 267257 300811 60889 Cre12.g528750.t1.2 AT2G37190.1 287124
KEGG description KEGG Pathway
Ribosome map03010
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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