40978 PRP11
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
40978 chr_6 PRP11 652529 653311 + PRP11
NCBI ID Ensembl Genomes exon ID
7443575 Thaps40978.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0053
PRK05279
0.9156
Chloroa_b-bind
0.9126
hypothetical protein
0.9009
FIG superfamily
0.8996
protease_HslV
0.8949
GRX_PICOT_like
0.8938
GRX_PICOT_like
0.892
FeThRed_B
0.8917
fabG
0.8891
TIM_phosphate_binding superfamily
0.8882
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CactinC_cactus superfamily Cactus-binding C-terminus of cactin protein; CactinC_cactus is the C-terminal 200 residues of the... - 82.016 1.01E-19 118 - 224 superfamily 264039
PRP11 Splicing factor 3a, subunit 2 [RNA processing and modification] - 227.248 2.85E-74 2 - 229 multi-dom 227571
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14572 PHATRDRAFT_14572 191765 167001 357810 Cre06.g252700.t1.2 AT2G32600.1 Not available
KEGG description KEGG Pathway
Spliceosome map03040
GO:0003676 GO:0005634 GO:0008270 -

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF
Log in to post comments