4387 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4387 chr_4 Mito_carr 896445 897690 + Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7447921 Thaps4387.3, Thaps4387.1, Thaps4387.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0060

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0239
 0.34

Most Highly Correlated Transcripts

41005

odpB
0.8999

25040

NA
0.8841

8119

hypothetical protein
0.8821

23291

hypothetical protein
0.8731

270308

hypothetical protein
0.8676

bd1360

(bd1360) ycf24
0.8657

33161

prfA
0.8585

30004

COG0385
0.8575

3438

hypothetical protein
0.8559

bd1319

(bd1319) ycf16
0.8551

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 90.0011 1.66E-22 36 - 120 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 90.0011 1.66E-22 36 - 120 superfamily 249634

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47954 PHATRDRAFT_47954 191504 223254 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 GO:0005743 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005743

mitochondrial inner membrane

Details: 
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
GO Category: 
CC

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