6045 Zinc_peptidase_like superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6045	chr_6	Zinc_peptidase_like superfamily	563976	566387	+	Zinc_peptidase_like superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448579	Thaps6045.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0379

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0053	0.56

Most Highly Correlated Transcripts

8762 SNF2_N 0.916	12836 EEP superfamily 0.9016	22764 hypothetical protein 0.8799	5689 HA 0.8785	262616 (MYB22) 0.8779	263509 mutl 0.8765
22688 hypothetical protein 0.8759	23979 zf-HC5HC2H superfamily 0.872	21727 DENN superfamily 0.8702	10753 hypothetical protein 0.8695

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Zinc_peptidase_like superfamily		Zinc peptidases M18, M20, M28, and M42; Zinc peptidases play vital roles in metabolic and signaling...	-	127.909	2.21E-32	227 - 488	superfamily	265470

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_43532	PHATRDRAFT_43532	275661	19784	232943	Not available	Not available	347179

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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