23979 zf-HC5HC2H superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23979 chr_9 zf-HC5HC2H superfamily 513336 519740 + zf-HC5HC2H superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449331 Thaps23979.3, Thaps23979.2, Thaps23979.4, Thaps23979.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0377

Most Highly Correlated Transcripts

25451

AAA superfamily
0.9368

26140

PRP8
0.9291

21568

hypothetical protein
0.9205

262616

(MYB22)
0.9198

21997

TPR_12
0.9198

24618

hypothetical protein
0.9193

24688

hypothetical protein
0.9174

23094

hypothetical protein
0.9135

23582

hypothetical protein
0.9134

22141

hypothetical protein
0.9092

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-HC5HC2H superfamily PHD-like zinc-binding domain; The members of this family are annotated as containing PHD domain,... - 61.5863 8.54E-11 1418 - 1545 superfamily 266793

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44901 PHATRDRAFT_44901 196416 244729 57793 Cre14.g614151.t1.1 AT3G14740.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0006355 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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