6727 Isy1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6727 chr_7 Isy1 332997 333944 - Isy1

Synonyms

NCBI ID Ensembl Genomes exon ID
7448943 Thaps6727.1, Thaps6727.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0274

Most Highly Correlated Transcripts

13794

WD40
0.9327

37118

FeThRed_B
0.9229

268144

OTU
0.9192

3348

hypothetical protein
0.9129

29469

hypothetical protein
0.9127

4535

hypothetical protein
0.9122

33348

IGPD superfamily
0.9122

33995

DUF1077
0.9106

31993

DUF3449
0.9102

30701

PRK05279
0.9092

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Isy1 superfamily Isy1-like splicing family; Isy1 protein is important in the optimisation of splicing. - 234.526 5.27E-76 1 - 279 superfamily 253637
Isy1 superfamily Isy1-like splicing family; Isy1 protein is important in the optimisation of splicing. - 234.526 5.27E-76 1 - 279 superfamily 253637

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_34280 PHATRDRAFT_34280 160713 304283 50362 Cre10.g427150.t1.2 AT3G18790.1 347251

KEGG

KEGG description KEGG Pathway
Spliceosome map03040

GO Terms

Not available -

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