6781 PTPLA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6781 chr_7 PTPLA 483559 486209 + PTPLA

Synonyms

NCBI ID Ensembl Genomes exon ID
7446222 Thaps6781.3, Thaps6781.4, Thaps6781.1, Thaps6781.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0085

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0182
 0.48

Most Highly Correlated Transcripts

bd843

(bd843) NA
0.9598

bd1306

(bd1306) NA
0.958

bd1645

(bd1645) tpt
0.9566

bd1078

(bd1078) NA
0.9505

bd1820

(bd1820) Fasciclin
0.9372

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9343

bd1403

(bd1403) NA
0.9304

bd1214

(bd1214) KISc_C_terminal
0.9252

bd1387

(bd1387) psbE
0.9239

bd1893

(bd1893) NA
0.9231

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PTPLA Protein tyrosine phosphatase-like protein, PTPLA; This family includes the mammalian protein... cl02156 143.169 3.35E-39 91 - 250 specific 252559
PTPLA superfamily Protein tyrosine phosphatase-like protein, PTPLA; This family includes the mammalian protein... - 143.169 3.35E-39 91 - 250 superfamily 261199

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44831 PHATRDRAFT_44831 234205 240990 453108 Cre03.g167924.t1.1 AT5G10480.1 433551

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments