7024 PLDc_PMFPLD_like_1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7024 chr_7 PLDc_PMFPLD_like_1 1064396 1066667 - PLDc_PMFPLD_like_1

Synonyms

NCBI ID Ensembl Genomes exon ID
7447064 Thaps7024.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0092

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0206
 0.21

Most Highly Correlated Transcripts

bd1081

(bd1081) NA
0.9715

bd1173

(bd1173) S_TKc
0.9645

bd856

(bd856) NA
0.9573

bd950

(bd950) NA
0.9517

bd1214

(bd1214) KISc_C_terminal
0.9444

36420

PLN03128
0.9389

4596

hypothetical protein
0.9385

bd1983

(bd1983) RecA-like_NTPases superfamily
0.9325

bd439

(bd439) POLBc_alpha
0.926

bd622

(bd622) NA
0.9131

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLDc_PMFPLD_like_1 Catalytic domain, repeat 1, of phospholipase D from Streptomyces Sp. Strain PMF and similar... cl15239 251.584 5.58E-78 43 - 238 specific 197207
PLDc_SF superfamily Catalytic domain of phospholipase D superfamily proteins; Catalytic domain of phospholipase D (PLD... - 101.213 4.75E-24 306 - 513 superfamily 265651
PLDc_SF superfamily Catalytic domain of phospholipase D superfamily proteins; Catalytic domain of phospholipase D (PLD... - 101.213 4.75E-24 306 - 513 superfamily 265651

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46400 PHATRDRAFT_46400 197022 257945 238451 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0008152 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

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