7059 COG0790
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7059 chr_7 COG0790 1161461 1162878 - COG0790

Synonyms

NCBI ID Ensembl Genomes exon ID
7447083 Thaps7059.2, Thaps7059.1, Thaps7059.4, Thaps7059.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0156

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0064
 0.41

Most Highly Correlated Transcripts

bd1313

(bd1313) psbH
0.8892

bd1949

(bd1949) NA
0.8886

bd1893

(bd1893) NA
0.8532

bd137

(bd137) Motor_domain superfamily
0.8492

bd790

(bd790) ABCC_MRP_domain2
0.8486

bd2073

(bd2073) psbB
0.8476

bd1387

(bd1387) psbE
0.8454

bd463

(bd463) Aa_trans superfamily
0.8379

bd837

(bd837) NA
0.8294

264628

UxaC
0.8271

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG0790 FOG: TPR repeat, SEL1 subfamily [General function prediction only] - 79.7031 2.10E-17 137 - 270 multi-dom 223861

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32841 PHATRDRAFT_32841 179181 225342 237001 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments