7103 GRASP55_65
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7103 chr_7 GRASP55_65 1292048 1293704 + GRASP55_65

Synonyms

NCBI ID Ensembl Genomes exon ID
7447107 Thaps7103.3, Thaps7103.2, Thaps7103.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0132

Most Highly Correlated Transcripts

6532

Eapp_C superfamily
0.8999

13448

Sec1
0.8983

7696

2_5_RNA_ligase2
0.8979

10115

NPD_like
0.8924

38123

Arrestin_N superfamily
0.8918

22785

DUF336
0.8873

24174

DUF1336 superfamily
0.8848

7810

hypothetical protein
0.8847

25350

Methyltransf_24
0.8843

5519

hypothetical protein
0.8838

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GRASP55_65 superfamily GRASP55/65 PDZ-like domain; GRASP55 (Golgi re-assembly stacking protein of 55 kDa) and GRASP65 (a... - 82.3013 1.02E-18 105 - 211 superfamily 252630
GRASP55_65 superfamily GRASP55/65 PDZ-like domain; GRASP55 (Golgi re-assembly stacking protein of 55 kDa) and GRASP65 (a... - 82.3013 1.02E-18 105 - 211 superfamily 252630
GRASP55_65 superfamily GRASP55/65 PDZ-like domain; GRASP55 (Golgi re-assembly stacking protein of 55 kDa) and GRASP65 (a... - 82.3013 1.02E-18 105 - 211 superfamily 252630

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50387 PHATRDRAFT_50387 197816 100892 208114 Not available Not available 485203

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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